52 Commits

Author SHA1 Message Date
897d3e5277 Added data location to README 2024-10-23 06:10:28 -04:00
a1c43228d9 Changed version number 2024-10-22 19:06:23 -04:00
8c614c78cb Fix versioning issues, resolves #1 2024-10-22 19:06:23 -04:00
0551faf085 Added site distances to stats dictionary, and second near neighbor functionality 2024-10-22 19:06:23 -04:00
87be8908e3 Updated scripts for post-processing data. 2024-10-22 19:06:23 -04:00
de65751b48 Modified scripts, small fixes and changed ordered caalculation 2024-10-22 19:06:23 -04:00
b32e0b1a8c Script updates and minor setting changes 2024-10-22 19:06:23 -04:00
583615ba4b Updated scripts to stuse standardized commands and automatic data caching 2024-10-22 19:06:22 -04:00
612e0f0c58 Allow for >=NumPy versioning to deal with C compilation header errors 2024-10-22 19:06:22 -04:00
7be90233c2 Versioning 2024-10-22 19:06:22 -04:00
f1a180b5a5 Non-numerical Hessian for Radial[T] 2024-10-22 19:06:22 -04:00
8cd48a1acd Modified scripts to use aspect ratios, Radial[T] formula update for gradient 2024-10-22 19:06:22 -04:00
2e9ed2f072 Fixed option overriding from squish command utility 2024-10-22 19:06:22 -04:00
8948b0cf16 Removed debug timer 2024-10-22 19:06:22 -04:00
4b98879efe Updated Cython compilation 2024-10-22 19:06:22 -04:00
df258a2858 Merge branch 'master' of github.com:ksjdragon/squish 2024-10-22 19:06:22 -04:00
9e25496f4d Updated Cython compilation and version 2024-10-22 19:06:05 -04:00
da2b5d420b Removed temporary output for width_diagrams 2024-10-22 19:06:05 -04:00
85d5486141 Reorganized Cython modules and updated Radial[T] formula 2024-10-22 19:06:05 -04:00
e7e7cefb56 Reformatted using spaces and python-black. 2024-10-22 19:06:05 -04:00
71fb42eb21 Updated scripts 2024-10-22 19:06:05 -04:00
b4d6b5dbd8 Added continuation for stopped simulation 2024-10-22 19:06:05 -04:00
0d65aa5366 More scripts for post processing 2024-10-22 19:06:05 -04:00
42454f21ee Changed versioning 2024-10-22 19:06:05 -04:00
48e5ff5015 Changed adaptive stepping and non-saving Flow simulations no longer store frames 2024-10-22 19:06:05 -04:00
4b472d2200 Changed diagram.py so that parallelization doesn't use excess memory, and other small tweaks 2024-10-22 19:06:04 -04:00
475d306e3a Changed version. 2024-10-22 19:06:04 -04:00
7bacb5b4da Removed comments and added temp/ to .gitignore 2024-10-22 19:06:04 -04:00
edf6ad9659 Width diagrams now computes using ordered calculations, and parallelizes it. Also, small fixes for other scripts. 2024-10-22 19:06:04 -04:00
d31029d95d Added calculations for ordered sites 2024-10-22 19:06:04 -04:00
d748b25040 Restructuring for package to submit to PyPA. 2024-10-22 19:06:04 -04:00
4f23f0c43f Changed loading function, and only create folder with save. 2024-10-22 19:06:04 -04:00
3841e6fe6b Small fixes for diagrams and simulations 2024-10-22 19:06:04 -04:00
7e5e711533 Made diagram.py work properly, and add multiprocessing to frame rendering. 2024-10-22 19:06:04 -04:00
989ef93f29 Large package reorganization, and changed saving method 2024-10-22 19:06:04 -04:00
5da4cf6a39 Updated documentation 2024-10-22 19:06:04 -04:00
44cf279aec Fixed typo 2024-10-22 19:06:04 -04:00
eedc628ec1 Updated documentation 2024-10-22 19:06:04 -04:00
a0b6ee2ffd Renamed library squish 2024-10-22 19:06:04 -04:00
d397ff93c2 Reorganized as a Python package 2024-10-22 19:06:04 -04:00
19b3b250b4 Changed license to AGPL-v3.0 2024-10-22 19:06:04 -04:00
e90e9ddb96 Added option to not compute hessian during search 2024-10-22 19:06:04 -04:00
f452301f0a Changed edge counting and added defect diagrams 2024-10-22 19:06:04 -04:00
51ddede5c7 Fixed typos 2024-10-22 19:06:03 -04:00
61c2862fb9 Added more detail to shrink diagrams and fixed unique equilibria detection for ordered equilibria. 2024-10-22 19:06:03 -04:00
a283a31755 Makes packsim.py output folders if they don't exist 2024-10-22 19:06:03 -04:00
5dd0bfb274 Fixed search mode for simulations 2024-10-22 19:06:03 -04:00
3b8d9d34b6 Implemented more efficient radial-t gradient calculation 2024-10-22 19:06:03 -04:00
1ec22c00e6 Fixed README typo 2024-10-22 19:06:03 -04:00
f910d579f7 Edited README file. 2024-10-22 19:06:03 -04:00